It might be you and not the programme that is wrong.
Why not tell us which box or line is missing the figure of your wages, and we can tell you if indeed it is incorrect? The problem is that there are so many places that wages could appear on the form. Is it missing from all of them? Or just some of them?
If it's 1040 page 1 line 7, you're right, big booboo from TurboTax.
If it's 2555 page 2 line 19, you're right, big booboo from TurboTax.
However, if you are talking about Form 1116 page 1 Part I section I box 1a, that box is the total foreign wages LESS any 2555 exclusion. So if your wages are $80,000 and your 2555 exclusion is $80,000, box 1a will be zero. The other way to report it (in this same scenario) is to have box 1a = 80,000 and box 2 = 80,000. In either case, you aren't going get any foreign tax credits for income which has been excluded on form 2555. You don't get to double dip.